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Secondary data · investigation outline All outlines

Does sewage still harm the life in Geneva's rivers?

Two of the canton's monitoring files joined station by station: ammonium, the chemical trace of sewage, against the small animals that live on the riverbed. Set against a river project that farmers said had its priorities in the wrong order.

The research question every step answers to

The relationship between ammonium (mg N/L, the 90th percentile of each year's samples) and the invertebrate index (IBGN, a score from 1 to 20) across Geneva's river monitoring stations, 1995 to 2022.

Human· Ammonium, from sewageagainstNatural· Invertebrate index
  1. 1Issue
  2. 2Research question
  3. 3Strategy and tensions
  4. 4Your dataset
  5. 5Treat the data
  6. 6Analysis
  7. 7Evaluation
  8. 8Write-up
Step 1

Find your issue, and check it is measured

An environmental issue: something happening, to something, because of something, with proof that somebody measures it.

Sewage still reaches the rivers that drain into Lake Geneva, from overflowing sewers and treatment works. The insect larvae, snails and worms on the riverbed live in that water all year, and the most sensitive of them disappear first.

Proof it is measured
Invertebrates in Geneva's rivers, opened: the canton nets the riverbed at each station up to four times a year and scores what it finds.
And its chemistry
Nutrients and major ions in Geneva's rivers, opened: the same stations and the same station codes, with ammonium among twenty parameters.
The system
Input: ammonium in sewage, from treatment works and from combined sewers that overflow in storms, and some from farmland. Store: the river and the animals living on its bed. Process: bacteria turn ammonium into nitrate and use up oxygen doing it, and some of it is toxic as ammonia, more so in warm water. Output: flow into the lake. Feedback: negative, through people. A river that scores badly is the case for fixing its sewers, which cuts the input.
Open step 1 in the guide
Step 2

Write your research question

One sentence naming the indicator and its units, the years and the places. No strategy in it.

The relationship between ammonium (mg N/L, the 90th percentile of each year's samples) and the invertebrate index (IBGN, a score from 1 to 20) across Geneva's river monitoring stations, 1995 to 2022.

Independent variable
Ammonium, in milligrams of nitrogen per litre. Most of it comes from sewage, so it marks where sewage reaches a river. Human.
Dependent variable
The invertebrate index (Indice Biologique Global Normalisé, IBGN): a score from 1 to 20 set by how many kinds of animal are on the riverbed and how sensitive to pollution the most sensitive of them is. Higher is better. The canton's own target for its rivers is at least 12. Natural.
Not obvious
The index answers to the channel as well as the water. A river in a concrete bed can score badly with clean water, and a winding one with some ammonium can score well. So ammonium may explain a lot of the pattern, or only part of it.
Open step 2 in the guide
Step 3

Find a real-world strategy and its tensions

One real-world strategy people are genuinely arguing about, two named positions, and what the tension does.

Geneva's river restoration programme, and its first large project: the Aire.

The strategy
In April 1997 the canton added river restoration (renaturation, the word to search for in Geneva's documents) to its water law. Restoration means taking rivers out of concrete channels and giving them room to move. A fund of about 11.8 million francs a year pays for it. The Aire was the programme's first large project: bill PL 8490, debated in Geneva's parliament, the Grand Conseil, on 30 August 2001.
Position 1 · environmental, political
The canton, in the bill's report: stopping treatment works from discharging into the river, and restoring it, meant "la qualité des eaux va donc en principe sensiblement s'améliorer": water quality should improve substantially.
Position 2 · economic, cultural
Marc-André Chevalley and Pierre Dupraz, speaking for the farmers in the same debate: the project was far too big ("sur-dimensionnée, relevant même de la science-fiction"). And the order was wrong: "améliorer d'abord la qualité de l'eau", improve the water first, then free the river.
The tension
Land for the river against land for farming. Giving the Aire room to move takes fields, some of them the canton's protected best arable land.
What it does
Uneven costs: the whole river benefits, but only a few farmers lose land.
For the environment
Both sides agreed the water had to get cleaner. They disagreed about whether room for the river is how you get there.
Link to the question
The farmers said clean the water first; the canton said free the river too. The invertebrate index answers to both, the water and the channel. How closely it follows ammonium says how much of the riverbed's life is about the water alone.
Open step 3 in the guide
Step 4

Select and document your data

A dataset you can defend: counted, documented, and cut to a rule fixed before you looked.

Source 1 · invertebrates
Canton de Genève, LCE_HYB_TM_IBGN on the SITG catalogue (Geneva's official map and data service): a CSV inside a zip, semicolon-separated. Read the metadata PDF in the zip's DOC folder. One row is one station in one year: its mean index (IBGN_MOYENNE), how many samplings that mean came from (NB_VALEUR, 1 to 4), and the number of kinds of animal found (TAXON_SOMME).
Source 2 · ammonium
Canton de Genève, LCE_HYB_TM_MAJEURS, the same service. One row is one station in one year; ammonium is N_NH4.
Inclusion rule
Every station-year that appears in both files: 1995 to 2022, because the invertebrates stop in 2022. Take out any ammonium written as −99, the file's code for missing, or it ranks as the cleanest water in Geneva. None of the matched rows had one on 25 September 2026; check yours.
The join
Match the two files on station code (CODEMESURE) and year (ANNEE_MESURE in one, ANNEE in the other), never on the station name: 22 different stations in the invertebrate file are called Embouchure, because every river has a mouth.
Read the column
Ammonium is each year's 90th percentile, not its mean: nine samples in ten were at or below it, so it reports the bad days. The index is a mean of one to four samplings. Say so when you describe the variables.
Derived quantities
For each station, the average of its matched years: one ammonium value and one index per station. Most stations were sampled in two to four of the years; averaging stops a station counting several times over.
How the numbers were made
Measured directly. Invertebrates are netted from the riverbed and identified in the laboratory, and the score comes from the kinds found. Ammonium comes from water samples analysed in the canton's own programme.
Controls
Pair: both values come from the same station in the same year before anything is averaged. Restrict: only the years both files cover, and only stations with a matched year.
Credit
Canton de Genève, SITG open data, with the extraction dates.
554
invertebrate station-years, 1995 to 2022
408
of them with an ammonium value
145
stations, one pair of numbers each
75
rivers and streams they sit on
Open step 4 in the guide
Step 5

Treat your data

Run a statistical test, leading to figures you built and a statistical result.

Spearman's rank correlation, two-tailed, at p = 0.05.

Why this test
A relationship between two measurements on the same 145 stations. Ammonium is heavily skewed (most stations low, a few very high), so a rank test is safer than Pearson's.
Decided before running it
n = 145 stations. Critical value about 0.16 (most tables stop at 100; use the formula your table gives for larger samples). Tied values take the average of their ranks. Free calculators: Social Science Statistics, Geography Fieldwork.
Which way
More ammonium with a lower index is a negative correlation. Write down which sign you expect, and why, before you run it.
The figure to build
Ammonium, 90th percentile (mg N/L)Invertebrate index (IBGN, 1 to 20)
Figure 1. Ammonium against the invertebrate index, 145 Geneva river stations, 1995 to 2022. One dot per station. Data: Canton de Genève, SITG. Ammonium spans three orders of magnitude, so try a logarithmic x axis, and draw the canton's target of 12 as a line.
Open step 5 in the guide
Where this outline stops

The correlation has not been run. Write the hypothesis, make the join, then plot and test. Step 7 starts with the channel, since a concrete bed lowers the index whatever the water, and with timing: ammonium's 90th percentile catches the worst days, while the animals are netted on one to four days a year.

The sources

Every one is public. The line under each says what it shows in this investigation. Follow the link to the original before citing it.

This outline plans an investigation rather than reporting one. The counts come from the SITG files downloaded on 25 September 2026. The correlation has not been calculated. The years, the join and the choice of variables are the author's, not the canton's. The summaries of each source are also the author's own: follow the links to the originals before citing them. Checked 25 September 2026.

Does sewage still harm the life in Geneva's rivers? · Investigation outline · ESS IA guide | Revise